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JuliaFEM.jl/test/test_xdmf.jl
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2015-06-27 19:33:30 +03:00

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Julia

# This file is a part of JuliaFEM.
# License is MIT: see https://github.com/JuliaFEM/JuliaFEM.jl/blob/master/LICENSE.md
using FactCheck
using Logging
@Logging.configure(level=INFO)
using LightXML
testdata = """\
<?xml version="1.0" encoding="utf-8"?>
<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.1">
<Domain>
<Grid CollectionType="Temporal" GridType="Collection" Name="Collection">
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
<Grid Name="Grid">
<Time Value="123"/>
<Geometry Type="XYZ">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="4">0 0 0 1 0 0 0 1 0 0 0 1</DataItem>
</Geometry>
<Topology Dimensions="1" Type="Mixed">
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">6 0 1 2 3</DataItem>
</Topology>
<Attribute Center="Cell" Name="Temperature field" Type="Scalar">
<DataItem DataType="Int" Dimensions="1" Format="XML" Precision="4">56</DataItem>
</Attribute>
<Attribute Center="Node" Name="Density" Type="Vector">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="4">1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 11.0 12.0</DataItem>
</Attribute>
</Grid>
</Grid>
</Domain>
</Xdmf>
"""
# makes no sense for vector field
# <DataItem DataType="Float" Dimensions="4" Format="XML" Precision="4">1 2 4 7</DataItem>
facts("test test data") do
xdoc = XMLDocument()
xroot = create_root(xdoc, "Xdmf")
set_attribute(xroot, "xmlns:xi", "http://www.w3.org/2001/XInclude")
set_attribute(xroot, "Version", "2.1")
domain = new_child(xroot, "Domain")
temporal_collection = new_child(domain, "Grid")
set_attribute(temporal_collection, "CollectionType", "Temporal")
set_attribute(temporal_collection, "GridType", "Collection")
set_attribute(temporal_collection, "Name", "Collection")
geometry = new_child(temporal_collection, "Geometry")
set_attribute(geometry, "Type", "None")
topology = new_child(temporal_collection, "Topology")
set_attribute(topology, "Dimensions", "0")
set_attribute(topology, "Type", "NoTopology")
grid = new_child(temporal_collection, "Grid")
set_attribute(grid, "Name", "Grid")
time = new_child(grid, "Time")
set_attribute(time, "Value", "123")
geometry = new_child(grid, "Geometry")
set_attribute(geometry, "Type", "XYZ")
dataitem = new_child(geometry, "DataItem")
set_attribute(dataitem, "DataType", "Float")
set_attribute(dataitem, "Dimensions", "12")
set_attribute(dataitem, "Format", "XML")
set_attribute(dataitem, "Precision", "4")
add_text(dataitem, "0 0 0 1 0 0 0 1 0 0 0 1")
topology = new_child(grid, "Topology")
set_attribute(topology, "Dimensions", "1")
set_attribute(topology, "Type", "Mixed")
dataitem = new_child(topology, "DataItem")
set_attribute(dataitem, "DataType", "Int")
set_attribute(dataitem, "Dimensions", "5")
set_attribute(dataitem, "Format", "XML")
set_attribute(dataitem, "Precision", 4)
add_text(dataitem, "6 0 1 2 3")
attribute = new_child(grid, "Attribute")
set_attribute(attribute, "Center", "Cell")
set_attribute(attribute, "Name", "Temperature field")
set_attribute(attribute, "Type", "Scalar")
dataitem = new_child(attribute, "DataItem")
set_attribute(dataitem, "DataType", "Int")
set_attribute(dataitem, "Dimensions", 1)
set_attribute(dataitem, "Format", "XML")
set_attribute(dataitem, "Precision", 4)
add_text(dataitem, "56")
attribute = new_child(grid, "Attribute")
set_attribute(attribute, "Center", "Node")
set_attribute(attribute, "Name", "Density")
set_attribute(attribute, "Type", "Vector")
dataitem = new_child(attribute, "DataItem")
set_attribute(dataitem, "DataType", "Float")
set_attribute(dataitem, "Dimensions", 12)
set_attribute(dataitem, "Format", "XML")
set_attribute(dataitem, "Precision", 4)
add_text(dataitem, "1.0 2.0 3.0 4.0 5.0 6.0 7.0 8.0 9.0 10.0 11.0 12.0")
#save_file(xdoc, "/tmp/model.xmf")
@fact string(xdoc) => testdata
end
using JuliaFEM.xdmf: xdmf_new_model, xdmf_new_grid, xdmf_new_temporal_collection, xdmf_new_mesh, xdmf_new_field, xdmf_save_model
facts("test model write XML") do
X = [0 0 0; 1 0 0; 0 1 0; 0 0 1]'
elmap = [6 1 2 3 4]' # element type 6, nodes 1 2 3 4
temperature_field = [56]
density_field = Float64[1 2 3; 4 5 6; 7 8 9; 10 11 12]'
xdoc, model = xdmf_new_model()
temporal_collection = xdmf_new_temporal_collection(model)
grid = xdmf_new_grid(temporal_collection; time=123)
xdmf_new_mesh(grid, X, elmap)
xdmf_new_field(grid, "Temperature field", "elements", temperature_field)
xdmf_new_field(grid, "Density", "nodes", density_field)
@fact string(xdoc) => testdata
end
facts("test that xdmf throws error when trying to add field not able to handle") do
xdoc, model = xdmf_new_model()
temporal_collection = xdmf_new_temporal_collection(model)
grid = xdmf_new_grid(temporal_collection; time=123)
temperature_field = ["56"] # strings not supported by xdmf
@fact_throws xdmf_new_field(grid, "unknown field data", "elements", temperature_field)
end
facts("test saving xdmf model") do
xdoc, model = xdmf_new_model()
# FIXME: xdoc here is just / of xml file, we're not interested of it but
# xdmf_new_model returns it that we're able to save xml file.
t = tempname()
xdmf_save_model(xdoc, t)
@fact isfile(t) => true
end