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JuliaFEM.jl/src/assembly.jl
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# This file is a part of JuliaFEM.
# License is MIT: see https://github.com/JuliaFEM/JuliaFEM.jl/blob/master/LICENSE.md
# Functions to handle global assembly of problem
type CAssembly
interior_dofs :: Vector{Int}
boundary_dofs :: Vector{Int}
F :: Factorization
Kc :: SparseMatrixCSC
fc :: SparseMatrixCSC
Ki :: SparseMatrixCSC
fi :: SparseMatrixCSC
end
function assemble!(assembly::Assembly, problem::AllProblems, time::Float64, empty_assembly::Bool=true)
if empty_assembly
empty!(assembly)
end
for element in get_elements(problem)
assemble!(assembly, problem, element, time)
end
end
function assemble(problem::AllProblems, time::Float64)
assembly = Assembly()
for element in get_elements(problem)
assemble!(assembly, problem, element, time)
end
return assembly
end
""" Return condensed system. """
function assemble(problem::FieldProblem, time::Float64, boundary_dofs::Vector{Int})
assembly = Assembly()
for element in get_elements(problem)
assemble!(assembly, problem, element, time)
end
return condensate(assembly, boundary_dofs)
end
function condensate(assembly::Assembly, boundary_dofs_::Vector{Int})
K = sparse(assembly.stiffness_matrix)
all_dofs = unique(assembly.stiffness_matrix.I)
boundary_dofs = intersect(all_dofs, boundary_dofs_)
interior_dofs = setdiff(all_dofs, boundary_dofs_)
dim = size(K, 1)
f = sparse(assembly.force_vector, dim, 1)
# check that matrix is symmetric
asdf = maximum(abs(1/2*(K + K') - K))
if asdf > 1.0e-6
info(full(K))
error("asdf $asdf > 1.0e-6")
end
K = 1/2*(K + K')
F::Factorization = cholfact(K[interior_dofs, interior_dofs])
# info("condensation: all dofs: ", all_dofs)
# info("condensation: interior dofs: ", interior_dofs)
# info("condensation: boundary dofs: ", boundary_dofs)
# info("manually condensated")
# Kman = K[boundary_dofs, boundary_dofs] - K[boundary_dofs,interior_dofs] * inv(full(K[interior_dofs, interior_dofs])) * K[interior_dofs, boundary_dofs]
# info("\n$(full(Kman))")
#info("K = \n$(full(K))")
#Ki = K[interior_dofs, boundary_dofs]
Ki = K[interior_dofs, boundary_dofs]
fi = f[interior_dofs]
# info("condensated using factorization")
# LL = K[boundary_dofs, boundary_dofs] - K[boundary_dofs, interior_dofs] * (K[interior_dofs, interior_dofs] \ K[interior_dofs, boundary_dofs])
# info(LL)
Ks = F \ Ki
Fs = F \ fi
dim = size(K, 1)
Kc = spzeros(dim, dim)
fc = spzeros(dim, 1)
Kc[boundary_dofs, boundary_dofs] = K[boundary_dofs, boundary_dofs] - Ki' * Ks
fc[boundary_dofs] = f[boundary_dofs] - Ki' * Fs
return CAssembly(interior_dofs, boundary_dofs, F, Kc, fc, Ki, fi)
end
function reconstruct!(ca::CAssembly, x::SparseMatrixCSC)
# info("size of la = ", size(la))
# info("size of ca.Ki = ", size(ca.Ki))
# info("size of ca.fi = ", size(ca.fi))
# info("size of la[ca.interior_dofs] = ", size(la[ca.interior_dofs]))
# info("interior dofs: $(ca.interior_dofs)")
# info("boundary dofs: $(ca.boundary_dofs)")
# info("ca.fi = $(ca.fi')")
# info("sol1 = ", full(ca.F \ ca.fi)')
# info("sol2 = ", full(ca.F \ (ca.Ki*x[ca.boundary_dofs]))')
x[ca.interior_dofs] += ca.F \ (ca.fi - ca.Ki*x[ca.boundary_dofs])
end
function Base.(:+)(ass1::Assembly, ass2::Assembly)
mass_matrix = ass1.mass_matrix + ass2.mass_matrix
stiffness_matrix = ass1.stiffness_matrix + ass2.stiffness_matrix
force_vector = ass1.force_vector + ass2.force_vector
return Assembly(mass_matrix, stiffness_matrix, force_vector)
end