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refactor: Comment out AsterReader includes (requires HDF5)

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Temporarily disabled Code Aster .med format reader which depends on HDF5.
Will re-enable via package extensions.

ABAQUS .inp reader remains available via IO submodule.
This commit is contained in:
Jukka Aho
2025-11-08 14:33:16 +02:00
parent 4172979478
commit 478e90bf70
2 changed files with 26 additions and 26 deletions
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src/readers.jl
+3 -3
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@@ -10,6 +10,6 @@ include("readers/parse_model.jl")
include("readers/create_surface_elements.jl")
include("readers/abaqus_download.jl")
# AsterReader - Code Aster .med file format
include("readers/read_aster_mesh.jl")
include("readers/read_aster_results.jl")
# AsterReader - Code Aster .med file format (requires HDF5)
# include("readers/read_aster_mesh.jl")
# include("readers/read_aster_results.jl")
src/readers/read_aster_mesh.jl
+23 -23
View File
@@ -2,7 +2,7 @@
# License is MIT: see https://github.com/JuliaFEM/AsterReader.jl/blob/master/LICENSE
function aster_parse_nodes(section; strip_characters=true)
nodes = Dict{Any, Vector{Float64}}()
nodes = Dict{Any,Vector{Float64}}()
has_started = false
for line in split(section, '\n')
m = collect((string(m.match) for m in eachmatch(r"[\w.-]+", line)))
@@ -33,7 +33,7 @@ end
""" Code Aster binary file (.med). """
mutable struct MEDFile
data :: Dict
data::Dict
end
function MEDFile(fn::String)
@@ -67,9 +67,9 @@ Notes
One node set id can have multiple names.
"""
function get_node_sets(med::MEDFile, mesh_name::String)::Dict{Int64, Vector{String}}
function get_node_sets(med::MEDFile, mesh_name::String)::Dict{Int64,Vector{String}}
mesh = get_mesh(med, mesh_name)
node_sets = Dict{Int64, Vector{String}}(0 => ["OTHER"])
node_sets = Dict{Int64,Vector{String}}(0 => ["OTHER"])
if !haskey(mesh, "NOEUD")
return node_sets
end
@@ -92,9 +92,9 @@ human-readable name for element set.
One element set id can have multiple names.
"""
function get_element_sets(med::MEDFile, mesh_name::String)::Dict{Int64, Vector{String}}
function get_element_sets(med::MEDFile, mesh_name::String)::Dict{Int64,Vector{String}}
mesh = get_mesh(med, mesh_name)
element_sets = Dict{Int64, Vector{String}}()
element_sets = Dict{Int64,Vector{String}}()
if !haskey(mesh, "ELEME")
return element_sets
end
@@ -115,7 +115,7 @@ function get_element_sets(med::MEDFile, mesh_name::String)::Dict{Int64, Vector{S
return element_sets
end
function get_nodes(med::MEDFile, nsets::Dict{Int, Vector{String}}, mesh_name::String)
function get_nodes(med::MEDFile, nsets::Dict{Int,Vector{String}}, mesh_name::String)
increments = keys(med.data["ENS_MAA"][mesh_name])
@assert length(increments) == 1
increment = first(increments)
@@ -124,17 +124,17 @@ function get_nodes(med::MEDFile, nsets::Dict{Int, Vector{String}}, mesh_name::St
nnodes = length(nset_ids)
node_ids = get(nodes, "NUM", collect(1:nnodes))
node_coords = nodes["COO"]
dim = round(Int, length(node_coords)/nnodes)
dim = round(Int, length(node_coords) / nnodes)
node_coords = reshape(node_coords, nnodes, dim)'
d = Dict{Int64}{Tuple{Vector{String}, Vector{Float64}}}()
for i=1:nnodes
d = Dict{Int64}{Tuple{Vector{String},Vector{Float64}}}()
for i = 1:nnodes
nset = nsets[nset_ids[i]]
d[node_ids[i]] = (nset, node_coords[:, i])
end
return d
end
function get_connectivity(med::MEDFile, elsets::Dict{Int64, Vector{String}}, mesh_name::String)
function get_connectivity(med::MEDFile, elsets::Dict{Int64,Vector{String}}, mesh_name::String)
if !haskey(elsets, 0)
elsets[0] = ["OTHER"]
end
@@ -142,16 +142,16 @@ function get_connectivity(med::MEDFile, elsets::Dict{Int64, Vector{String}}, mes
@assert length(increments) == 1
increment = first(increments)
all_elements = med.data["ENS_MAA"][mesh_name][increment]["MAI"]
d = Dict{Int64, Tuple{Symbol, Vector{String}, Vector{Int64}}}()
d = Dict{Int64,Tuple{Symbol,Vector{String},Vector{Int64}}}()
for eltype in keys(all_elements)
elements = all_elements[eltype]
elset_ids = elements["FAM"]
nelements = length(elset_ids)
element_ids = get(elements, "NUM", collect(1:nelements))
element_connectivity = elements["NOD"]
element_dim = round(Int, length(element_connectivity)/nelements)
element_dim = round(Int, length(element_connectivity) / nelements)
element_connectivity = reshape(element_connectivity, nelements, element_dim)'
for i=1:nelements
for i = 1:nelements
eltype = Symbol(eltype)
elco = element_connectivity[:, i]
elset = elsets[elset_ids[i]]
@@ -173,7 +173,7 @@ If mesh file contains several meshes, one must provide the mesh name as
additional argument or expcetion will be thrown.
"""
function aster_read_mesh(filename::String, mesh_name=nothing)
function aster_read_mesh_raw(filename::String, mesh_name=nothing)
isfile(filename) || error("Cannot read mesh file $filename: file not found.")
aster_read_mesh_(MEDFile(filename), mesh_name)
end
@@ -188,14 +188,14 @@ function aster_read_mesh_(med::MEDFile, mesh_name=nothing)
mesh_name in mesh_names || error("Mesh $mesh_name not found from mesh file $fn. Available meshes: $all_meshes")
end
mesh = Dict{String, Dict}()
mesh["nodes"] = Dict{Int, Vector{Float64}}()
mesh["node_sets"] = Dict{String, Vector{Int}}()
mesh["elements"] = Dict{Int, Vector{Int}}()
mesh["element_types"] = Dict{Int, Symbol}()
mesh["element_sets"] = Dict{String, Vector{Int}}()
mesh["surface_sets"] = Dict{String, Vector{Tuple{Int, Symbol}}}()
mesh["surface_types"] = Dict{String, Symbol}()
mesh = Dict{String,Dict}()
mesh["nodes"] = Dict{Int,Vector{Float64}}()
mesh["node_sets"] = Dict{String,Vector{Int}}()
mesh["elements"] = Dict{Int,Vector{Int}}()
mesh["element_types"] = Dict{Int,Symbol}()
mesh["element_sets"] = Dict{String,Vector{Int}}()
mesh["surface_sets"] = Dict{String,Vector{Tuple{Int,Symbol}}}()
mesh["surface_types"] = Dict{String,Symbol}()
elsets = get_element_sets(med, mesh_name)
nsets = get_node_sets(med, mesh_name)