Commit Graph

976 Commits

Author SHA1 Message Date
Jukka Aho c7ff354618 Remove badly designed test (#208)
Solution not known for tests. Let's create simpler tests with known solutions.
2018-07-25 14:10:05 +03:00
femtocleaner[bot] 33c8657f56 Fix deprecations (#206) 2018-07-05 11:21:10 +03:00
Jukka Aho eb600c940e Drop Logging.jl (#205)
Julia 0.7 is having improved logging capabilities, we can drop
Logging.jl.
2018-07-04 22:59:32 +03:00
Jukka Aho 8bfda8c6e0 fix bug of setting sigma in Modal analysis (#204) 2018-07-04 21:51:09 +03:00
Jukka Aho 7e1b5d2a0c Call Nonlinear analysis using run! (#201)
`analysis(time)` and `solve!(analysis, time)` are going to be deprecated later on.
2018-06-06 15:36:46 +03:00
Jukka Aho b8ac49c5a8 Use FEMBeam.jl (#200)
Use FEMBeam.jl to solve beam problems. Added an example, where
natural frequencies of frequencies of 3d frame structure are
calculated. Some minor modifications to Modal analysis is done to make
Xdmf writing of 6 dof nodes work.
2018-06-04 21:29:37 +03:00
Jukka Aho 413526804b Improve documentation (#199)
Let's use Literate.jl to automatically generate usage examples.

* Automatically generate documentation from other packages (first try to include each package's docs/src/index.md, but if that fails, then use README.md to introduce the package).
* Add example how to calculate local element matrices.
* Add example how to perform 2d contact analysis.
2018-05-30 11:52:01 +03:00
Jukka Aho d0f68682ea Fix bug in writing two-dimensional problems (#198) 2018-05-25 17:54:36 +03:00
Jukka Aho e68eec89f9 Move contact mechanics to separate package (#196)
Development of auto-differentiated mortar contact mechanics in 2D is moved to own separate package, MortarContact2DAD. Other changes are similar to what is done with MortarContact2D: elements are added to problems using `add_slave_elements!` and `add_master_elements!` instead of `add_elements!`, to make interface more explicit. Also, problem name is `Contact2DAD`, so the dimension is now explicitly stated in problem name. (Also have `Mortar2DAD`, compare to the `Mortar2D` and `Contact2D` of `MortarContact2D.jl`.)
2018-05-17 09:45:18 +03:00
Jukka Aho 4941a4f005 Fix bug with sigma value (#197)
Sigma redefined.
2018-05-12 11:55:25 +03:00
Jukka Aho 9e28c6d604 Separate 2d contact code to own package (#195)
Moved plane contact related stuff to own separate package
`MortarContact2D.jl`, where the development continues.

The following changes to test files are done:

1) Problem name for plane mortar coupling is `Mortar2D` (was `Mortar`
before), and later on 3d coupling will be `Mortar`. So the dimension
of coupling operator is explicitly given in a problem name.

2) Before elements to coupling was defined using
```julia
update!(problem.elements, "master elements", master_elements)
add_elements!(problem, [slave_elements; master_elements])
```
Now, explicitly give master and slave elements as
```julia
add_slave_elements!(problem, slave_elements)
add_master_elements!(problem, master_elements)
```
Keep on mind that Lagrange multipliers are in slave side.
2018-05-07 15:14:42 +03:00
Jukka Aho 79170fcf23 Use package HeatTransfer.jl for heat problems (#194)
Heat transfer analysis is moved to its own package where the development continues. Two small modifications are needed for test files:

- Instead of `problem.properties.formulation`, we have two separate problems, `PlaneHeat` for two-dimensional problems and `Heat` for three-dimensional problems.
- Unnecessary prefixing of field names is changed. For example, now we simply have only "thermal conductivity" and not prefixed "temperature thermal conductivity".
2018-05-03 15:37:37 +03:00
Jukka Aho cfcd647cac Drop Dataframes (#193)
Looks that package is no more used in the code. Let's drop it.
2018-05-02 12:45:14 +03:00
Tero Frondelius 02dfdcfacd JuliaFEMLogo corner 2018-04-23 15:37:03 +03:00
Jukka Aho 0694ce1b06 Fix bug in eigenvalue solver (#191)
This closes issue #190.
2018-03-18 17:37:17 +07:00
Jukka Aho 23204ee15b Replace some rarely used functions (#188)
- `empty!(problem)` -> `empty!(problem.assembly)`
- `get_gdofs(element, ndim)` -> `get_gdofs(problem, element)`
2018-02-08 14:47:44 +07:00
Jukka Aho e2260d5e18 Update docs
Let's try this kind of approach where JuliaFEM.jl documentation
is collected from other packages. May work or then not.
2018-02-07 18:47:09 +02:00
Jukka Aho 6616ee05e1 Import get_problems from FEMBase 2018-01-29 23:13:41 +07:00
Jukka Aho 44fedbf91e Add Reexport to REQUIRE 2018-01-29 23:13:41 +07:00
Jukka Aho 5b93c48a3a Make JuliaFEM to use Analysis type from FEMBase
`Analysis` is basically doing same than `Solver` before, but has a
slighly simpler structure and is more general.
2018-01-29 23:13:41 +07:00
Jukka Aho 70dda739f9 use FEMBase v0.1.x (#185)
Lots of stuff moved from JuliaFEM.jl to FEMBase.jl.
2018-01-19 21:01:33 +07:00
Jukka Aho 66e11d300e Update REQUIRE 2017-12-27 19:43:49 +02:00
Jukka Aho 0fe98d23b9 remove matplotlib dependency
matplotlib cannot be installed during the generation of documentation,
ssl error. Use static images in documentation instead of automatically
generated ones.
2017-11-13 11:48:17 +02:00
Jukka Aho 86100e59ec add FEMBase.jl to REQUIRE 2017-11-13 11:48:17 +02:00
Jukka Aho 353904dbab Moved core functionality to FEMBase
Core functionality is moved to base package called FEMBase.jl. The
aim is that when developing new elements, solvers, materials and so on,
user only imports FEMBase.jl and uses the functionality there.
JuliaFEM.jl is a sort of "metapackage" collecting together all the
packages and features can be programmed in smaller packages focusing
only on one thing. This structure makes it attractive to contribute
smaller amount of code e.g. in the form of thesis. Moreover, FEMBase.jl
is under 2000 lines of code, which will be very clearly documented thus
everyone can understand the basic concepts behing JuliaFEM easily.
2017-11-13 11:48:17 +02:00
Jukka Aho 4ab9e77240 Update README.md
Add DOI for JuliaFEM v0.3.3.
2017-08-23 16:00:14 +03:00
Marja Rapo 1955403617 Fix documentation
Update documentation of several functions to match documentation guide.
2017-08-23 15:53:01 +03:00
Jukka Aho 2ebcbdb00d Special handling of constant metric Tet10
Mass matrix can be analytically solved if Tet10 metric is constant, i.e.
the midnodes are in the midpoint of corner nodes. This should increase
assembling speed of mass matrix.
2017-08-23 15:09:02 +03:00
Jukka Aho 1938faf2cf Update README.md 2017-08-21 18:00:09 +03:00
Jukka Aho 467cf4db27 README.rst -> README.md, we prefer Markdown 2017-08-21 18:00:09 +03:00
Jukka Aho 64494d2a1f remove CONTRIBUTING.rst, new contributing guide is in juliafem.org 2017-08-21 18:00:09 +03:00
Jukka Aho 457dc00879 Add module Abaqus back to code
Abaqus module is added back to code into `deprecations.jl` to make
code in seminar paper run on 0.3.3.
2017-08-21 10:05:32 +03:00
Jukka Aho 35fea30dac New test for Tet10 mass matrix 2017-08-20 20:51:00 +03:00
Jukka Aho 4070b309c8 Fix test of zero eigenmodes
A better known example.
2017-08-20 20:51:00 +03:00
Jukka Aho fe3daae587 Deprecate assemble!(problem, time, Val{:mass_matrix})
Use function assemble_mass_matrix!(problem, time)
2017-08-20 20:51:00 +03:00
Jukka Aho d01d1ea6e6 Improve performance of mass matrix assembly
* Avoid unnecessary memory allocations.
* Decrease integration order.
2017-08-20 20:51:00 +03:00
Jukka Aho 8f420fbaa5 Increase performance of writing results to Xdmf 2017-08-20 17:03:21 +03:00
Jukka Aho 923aad6f7c Calculate displacement gradient using FEMBasis 2017-08-20 14:49:42 +03:00
Jukka Aho 720d76a4ba Eliminate Dirichlet boundary conditions differently
Slicing is very expensive operation on sparse matrices. Avoid slicing
by calculating matrix product `K_red = C1*K*C1`, where C1 is diagonal
matrix. This should be much cheaper.
2017-08-20 12:13:12 +03:00
Jukka Aho ecaf8cb7fc Use global timer to measure performance
This makes syntax a little bit easier. Also, measure more accurately performance
of modal solver under investigation.
2017-08-19 13:30:01 +03:00
Jukka Aho 0fffdb52ba Test group_by_element_type 2017-08-19 00:01:47 +03:00
Jukka Aho 675f787c9a Preallocate matrices in Elasticity problem
Now style is to assemble all same kind/dimension elements at same time
in one function call, so it's possible to allocate all necessary
matrices only one time.
2017-08-18 23:27:26 +03:00
Jukka Aho 7eba2f782f New function group_by_element_type
Function groups a list of elements to several lists, where each
list contains elements of particular type.
2017-08-18 20:15:45 +03:00
Jukka Aho a24a5945a1 Fix deprecation warnings when using Julia 0.6.0 2017-08-18 17:45:52 +03:00
Jukka Aho ef66a8f74b Assemble several elements at a time
Now assemble! takes a vector of elements as input. This makes it
possible to preallocate memory for common matrices making code super
fast.
2017-08-17 17:49:39 +03:00
Jukka Aho aabcda2e26 Implement new function create_nodal_elements
This function can be used to create elements from node set defined
in mesh. Resulting elements are of type Poi1, that is, they don't
have any volume but it's still possible to add boundary conditions
to them which are then enforced in discrete sense.
2017-08-17 15:53:20 +03:00
Jukka Aho 89af6faad5 Fix test
Now both JuliaFEM and JuliaFEM.Preprocess export add_elements! and
it must be spesifically pointed out which one is used in test.
2017-08-16 17:20:55 +03:00
Rapo 367c4711b3 Implement new function add_elements!
Add new elements to the problem.
2017-08-16 17:20:55 +03:00
Jukka Aho 1966b7f894 Remove functions used rarely
A new problem can be defined with 8(!) different styles. Let's remove
the ones not used often.
2017-08-16 16:57:56 +03:00
Jukka Aho a6b198b1ab Templating data type of Field
Use template in type Field to make type stabile code. This should fix
problems related to type stability.
2017-08-16 00:00:03 +03:00